Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB8Q9UN66 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB8Q9UN66 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB8Q9UN66 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 HLA-A-201ENST00000376802 1334 ntBASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 AP005117.1-201ENST00000584346 1413 ntBASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 KRT18P67-201ENST00000432816 1264 ntBASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB8Q9UN66 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 AP001542.1-201ENST00000591314 200 ntBASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB8Q9UN66 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PCDHB8Q9UN66 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDHB8Q9UN66 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB8Q9UN66 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB8Q9UN66 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB8Q9UN66 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB8Q9UN66 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB8Q9UN66 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB8Q9UN66 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB8Q9UN66 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB8Q9UN66 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms