Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PRDM9Q9NQV7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRDM9Q9NQV7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRDM9Q9NQV7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRDM9Q9NQV7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 AP000997.3-201ENST00000623333 2250 ntBASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 DRAXINP1-201ENST00000437611 948 ntBASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 AC092329.2-201ENST00000598402 547 ntBASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 AC092119.3-201ENST00000612618 583 ntBASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRDM9Q9NQV7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 HCG4P8-203ENST00000443049 980 ntBASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 MIR3180-1-201ENST00000580374 94 ntBASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 MIR3180-3-201ENST00000584616 94 ntBASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRDM9Q9NQV7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms