Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1CQ9BQE3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 AC011270.2-201ENST00000624293 2550 ntBASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 YBX1P2-201ENST00000489612 999 ntBASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 AC008622.2-201ENST00000617006 1229 ntBASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 AP001094.4-201ENST00000579008 2176 ntBASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1CQ9BQE3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TUBA1CQ9BQE3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.3
TUBA1CQ9BQE3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TUBA1CQ9BQE3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TUBA1CQ9BQE3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TUBA1CQ9BQE3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TUBA1CQ9BQE3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TUBA1CQ9BQE3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 RNF152P1-201ENST00000397754 604 ntBASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBA1CQ9BQE3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 AC063952.2-201ENST00000498792 1227 ntBASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 AC022616.7-201ENST00000525383 220 ntBASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 MYC-208ENST00000641036 567 ntBASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBA1CQ9BQE3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms