Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.94□□□□□ -0.5
LITAFQ99732 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 AC105917.1-201ENST00000506637 2539 ntBASIC11.94□□□□□ -0.5
LITAFQ99732 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 RHBDF1P1-201ENST00000427504 1941 ntBASIC11.94□□□□□ -0.5
LITAFQ99732 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.94□□□□□ -0.5
LITAFQ99732 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.93□□□□□ -0.5
LITAFQ99732 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC11.93□□□□□ -0.5
LITAFQ99732 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.93□□□□□ -0.5
LITAFQ99732 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LITAFQ99732 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.93□□□□□ -0.5
LITAFQ99732 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LITAFQ99732 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.93□□□□□ -0.5
LITAFQ99732 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.93□□□□□ -0.5
LITAFQ99732 DUSP5P2-201ENST00000426873 1033 ntBASIC11.93□□□□□ -0.5
LITAFQ99732 F2R-202ENST00000505600 442 ntTSL 2 BASIC11.93□□□□□ -0.5
LITAFQ99732 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC11.93□□□□□ -0.5
LITAFQ99732 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC11.93□□□□□ -0.5
LITAFQ99732 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
LITAFQ99732 KLF2-202ENST00000592003 564 ntTSL 3 BASIC11.93□□□□□ -0.5
LITAFQ99732 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC11.93□□□□□ -0.5
LITAFQ99732 Six3os1_6.1-201ENST00000620790 196 ntBASIC11.93□□□□□ -0.5
LITAFQ99732 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.93□□□□□ -0.5
LITAFQ99732 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LITAFQ99732 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.93□□□□□ -0.5
LITAFQ99732 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 HR-201ENST00000312841 5351 ntTSL 5 BASIC11.93□□□□□ -0.5
LITAFQ99732 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
LITAFQ99732 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LITAFQ99732 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LITAFQ99732 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
LITAFQ99732 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LITAFQ99732 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.92□□□□□ -0.5
LITAFQ99732 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC11.92□□□□□ -0.5
LITAFQ99732 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC11.92□□□□□ -0.5
LITAFQ99732 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
LITAFQ99732 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC11.92□□□□□ -0.5
LITAFQ99732 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
LITAFQ99732 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC11.92□□□□□ -0.5
LITAFQ99732 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC11.92□□□□□ -0.5
LITAFQ99732 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC11.92□□□□□ -0.5
LITAFQ99732 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC11.92□□□□□ -0.5
LITAFQ99732 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 AC092118.2-201ENST00000613495 667 ntBASIC11.92□□□□□ -0.5
LITAFQ99732 MDK-213ENST00000617138 635 ntTSL 2 BASIC11.92□□□□□ -0.5
LITAFQ99732 HLA-B-256ENST00000639848 1089 ntBASIC11.92□□□□□ -0.5
LITAFQ99732 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.92□□□□□ -0.5
LITAFQ99732 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.92□□□□□ -0.5
LITAFQ99732 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LITAFQ99732 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LITAFQ99732 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.92□□□□□ -0.5
LITAFQ99732 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC11.92□□□□□ -0.5
LITAFQ99732 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
LITAFQ99732 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms