Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
BBS4Q96RK4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.03■□□□□ 0.32
BBS4Q96RK4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.03■□□□□ 0.32
BBS4Q96RK4 AC079602.3-201ENST00000623931 403 ntBASIC17.03■□□□□ 0.32
BBS4Q96RK4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BBS4Q96RK4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.03■□□□□ 0.32
BBS4Q96RK4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 GNAS-203ENST00000306120 1878 ntBASIC17.03■□□□□ 0.32
BBS4Q96RK4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 LINC00602-201ENST00000629776 2065 ntBASIC17.03■□□□□ 0.32
BBS4Q96RK4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BBS4Q96RK4 AC134043.2-201ENST00000624206 2238 ntBASIC17.02■□□□□ 0.32
BBS4Q96RK4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BBS4Q96RK4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BBS4Q96RK4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.02■□□□□ 0.32
BBS4Q96RK4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.02■□□□□ 0.32
BBS4Q96RK4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BBS4Q96RK4 AC067852.2-201ENST00000590513 2313 ntBASIC17.02■□□□□ 0.32
BBS4Q96RK4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BBS4Q96RK4 AC132938.6-201ENST00000623828 1655 ntBASIC17.02■□□□□ 0.32
BBS4Q96RK4 HOMER2P1-201ENST00000455653 964 ntBASIC17.02■□□□□ 0.32
BBS4Q96RK4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.02■□□□□ 0.32
BBS4Q96RK4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.02■□□□□ 0.32
BBS4Q96RK4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BBS4Q96RK4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BBS4Q96RK4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.02■□□□□ 0.32
BBS4Q96RK4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.02■□□□□ 0.32
BBS4Q96RK4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.02■□□□□ 0.32
BBS4Q96RK4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
BBS4Q96RK4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
BBS4Q96RK4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
BBS4Q96RK4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
BBS4Q96RK4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BBS4Q96RK4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BBS4Q96RK4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
BBS4Q96RK4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BBS4Q96RK4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BBS4Q96RK4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BBS4Q96RK4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
BBS4Q96RK4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.02■□□□□ 0.31
BBS4Q96RK4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
BBS4Q96RK4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BBS4Q96RK4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 KRT18P55-202ENST00000578578 1546 ntBASIC17.01■□□□□ 0.31
BBS4Q96RK4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 KRT18P48-201ENST00000434763 852 ntBASIC17.01■□□□□ 0.31
BBS4Q96RK4 AC113404.2-201ENST00000507884 177 ntBASIC17.01■□□□□ 0.31
BBS4Q96RK4 DUTP2-201ENST00000519164 463 ntBASIC17.01■□□□□ 0.31
BBS4Q96RK4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BBS4Q96RK4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BBS4Q96RK4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms