Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFRSF25Q93038 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF25Q93038 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF25Q93038 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF25Q93038 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.33■□□□□ 0.85
TNFRSF25Q93038 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.33■□□□□ 0.85
TNFRSF25Q93038 ATP5G2P1-201ENST00000433580 426 ntBASIC20.33■□□□□ 0.85
TNFRSF25Q93038 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.33■□□□□ 0.85
TNFRSF25Q93038 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFRSF25Q93038 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFRSF25Q93038 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.33■□□□□ 0.84
TNFRSF25Q93038 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF25Q93038 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF25Q93038 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TNFRSF25Q93038 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF25Q93038 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF25Q93038 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF25Q93038 AC233702.3-201ENST00000578656 1387 ntBASIC20.33■□□□□ 0.84
TNFRSF25Q93038 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF25Q93038 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 AC007967.3-201ENST00000434308 558 ntBASIC20.32■□□□□ 0.84
TNFRSF25Q93038 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 AC069148.1-201ENST00000608741 768 ntBASIC20.32■□□□□ 0.84
TNFRSF25Q93038 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF25Q93038 AC133963.1-201ENST00000504166 1679 ntBASIC20.32■□□□□ 0.84
TNFRSF25Q93038 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 KRT18P1-202ENST00000452408 1331 ntBASIC20.31■□□□□ 0.84
TNFRSF25Q93038 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 AC005104.2-201ENST00000427818 678 ntBASIC20.31■□□□□ 0.84
TNFRSF25Q93038 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 AC011840.4-201ENST00000578471 627 ntBASIC20.31■□□□□ 0.84
TNFRSF25Q93038 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF25Q93038 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms