Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.11■□□□□ 0.97
STAG1Q8WVM7 RN7SL510P-201ENST00000581311 263 ntBASIC21.11■□□□□ 0.97
STAG1Q8WVM7 AC099336.1-202ENST00000602961 463 ntBASIC21.11■□□□□ 0.97
STAG1Q8WVM7 AL121772.3-201ENST00000610840 674 ntBASIC21.11■□□□□ 0.97
STAG1Q8WVM7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
STAG1Q8WVM7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
STAG1Q8WVM7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
STAG1Q8WVM7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
STAG1Q8WVM7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.11■□□□□ 0.97
STAG1Q8WVM7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 MINOS1P3-201ENST00000457048 203 ntBASIC21.1■□□□□ 0.97
STAG1Q8WVM7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.1■□□□□ 0.97
STAG1Q8WVM7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 AC026396.1-201ENST00000419388 421 ntBASIC21.09■□□□□ 0.97
STAG1Q8WVM7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 AC009533.2-201ENST00000543664 586 ntBASIC21.09■□□□□ 0.97
STAG1Q8WVM7 AC091304.2-201ENST00000564639 760 ntBASIC21.09■□□□□ 0.97
STAG1Q8WVM7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 AL732292.2-201ENST00000609649 430 ntBASIC21.09■□□□□ 0.97
STAG1Q8WVM7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.09■□□□□ 0.97
STAG1Q8WVM7 AC009949.1-201ENST00000623048 1830 ntBASIC21.08■□□□□ 0.97
STAG1Q8WVM7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 AC010460.3-201ENST00000511359 1579 ntBASIC21.08■□□□□ 0.97
STAG1Q8WVM7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.08■□□□□ 0.97
STAG1Q8WVM7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
STAG1Q8WVM7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
STAG1Q8WVM7 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.08■□□□□ 0.96
STAG1Q8WVM7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.08■□□□□ 0.96
STAG1Q8WVM7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms