Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 AC004951.3-201ENST00000418645 1148 ntBASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 LINC00304-203ENST00000565008 1864 ntBASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 FLJ38576-201ENST00000623820 2459 ntBASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 MCCD1P1-208ENST00000445732 328 ntBASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CNIH3Q8TBE1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 GPAT2P1-201ENST00000444924 1672 ntBASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNIH3Q8TBE1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.39■□□□□ 0.22
CNIH3Q8TBE1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms