Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 AC024563.2-201ENST00000603282 481 ntBASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIMC1Q8NDZ2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 MIR662-201ENST00000384847 95 ntBASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 AL031133.1-201ENST00000406807 723 ntBASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 RNF126P1-202ENST00000569893 925 ntBASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIMC1Q8NDZ2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 AC008764.6-201ENST00000595909 2069 ntBASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms