Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP11CQ8NB49 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP11CQ8NB49 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP11CQ8NB49 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP11CQ8NB49 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ATP11CQ8NB49 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP11CQ8NB49 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP11CQ8NB49 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP11CQ8NB49 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP11CQ8NB49 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 FZD10-202ENST00000539839 3282 ntBASIC18.72■□□□□ 0.59
ATP11CQ8NB49 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP11CQ8NB49 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 MIR662-201ENST00000384847 95 ntBASIC18.71■□□□□ 0.59
ATP11CQ8NB49 MIR149-201ENST00000384879 89 ntBASIC18.71■□□□□ 0.59
ATP11CQ8NB49 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP11CQ8NB49 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
ATP11CQ8NB49 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP11CQ8NB49 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP11CQ8NB49 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP11CQ8NB49 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP11CQ8NB49 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP11CQ8NB49 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP11CQ8NB49 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP11CQ8NB49 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP11CQ8NB49 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms