Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C9orf40Q8IXQ3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 AC007613.1-201ENST00000572811 2597 ntBASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 AC096582.2-201ENST00000510860 516 ntBASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 NOC2LP1-202ENST00000452600 2235 ntBASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
C9orf40Q8IXQ3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 NUS1P2-201ENST00000417358 873 ntBASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
C9orf40Q8IXQ3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.52■□□□□ 0.23
C9orf40Q8IXQ3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
C9orf40Q8IXQ3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms