Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 AC110285.5-201ENST00000611501 352 ntBASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 GPAT2P1-201ENST00000444924 1672 ntBASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 AL353807.1-201ENST00000427475 662 ntBASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 AC008040.2-201ENST00000461049 708 ntBASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 NKILA-202ENST00000614771 2598 ntBASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM42Q8IWZ5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 AC009065.1-201ENST00000564055 1225 ntBASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 MIR3180-5-201ENST00000583743 153 ntBASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 AC022211.2-201ENST00000585075 2527 ntBASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM42Q8IWZ5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 DUTP2-201ENST00000519164 463 ntBASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms