Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 EGLN1P1-201ENST00000531623 762 ntBASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 AC010240.3-201ENST00000607688 395 ntBASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 AC084018.2-201ENST00000613093 2607 ntBASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 AL024508.2-201ENST00000607749 1894 ntBASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 CYP2D8P-201ENST00000433633 1490 ntBASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC50Q8IVM0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 CROCCP1-201ENST00000426910 5675 ntBASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 AC009947.2-201ENST00000444014 672 ntBASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 TSPY15P-201ENST00000457163 923 ntBASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 NAPSB-206ENST00000562112 1266 ntBASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 MIR3180-4-201ENST00000582223 153 ntBASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 MIR4497-201ENST00000583208 89 ntBASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 AC024243.1-201ENST00000609234 778 ntBASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC50Q8IVM0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 AC011270.2-201ENST00000624293 2550 ntBASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms