Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 LYSMD4-203ENST00000378904 2122 ntBASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD2Q8IV50 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 DUSP5P2-201ENST00000426873 1033 ntBASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 AC120498.8-201ENST00000614275 531 ntBASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 CYP2T1P-202ENST00000641596 2535 ntBASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 AL513523.2-202ENST00000427283 2040 ntBASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD2Q8IV50 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms