Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19■□□□□ 0.63
RNF135Q8IUD6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19■□□□□ 0.63
RNF135Q8IUD6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 AC092910.1-201ENST00000482027 1129 ntBASIC19■□□□□ 0.63
RNF135Q8IUD6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19■□□□□ 0.63
RNF135Q8IUD6 AC068587.9-201ENST00000641814 219 ntBASIC19■□□□□ 0.63
RNF135Q8IUD6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19■□□□□ 0.63
RNF135Q8IUD6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19■□□□□ 0.63
RNF135Q8IUD6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
RNF135Q8IUD6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RNF135Q8IUD6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19■□□□□ 0.63
RNF135Q8IUD6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19■□□□□ 0.63
RNF135Q8IUD6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 HTR5BP-201ENST00000430851 1154 ntBASIC18.99■□□□□ 0.63
RNF135Q8IUD6 RNA5SP415-201ENST00000517246 115 ntBASIC18.99■□□□□ 0.63
RNF135Q8IUD6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 AP001269.4-201ENST00000609611 512 ntBASIC18.99■□□□□ 0.63
RNF135Q8IUD6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 CROCCP3-202ENST00000420820 1947 ntBASIC18.99■□□□□ 0.63
RNF135Q8IUD6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 HLA-J-201ENST00000462773 1622 ntBASIC18.99■□□□□ 0.63
RNF135Q8IUD6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF135Q8IUD6 KRT18P28-201ENST00000453838 1332 ntBASIC18.99■□□□□ 0.63
RNF135Q8IUD6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 HEIH-201ENST00000623091 1652 ntBASIC18.98■□□□□ 0.63
RNF135Q8IUD6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 RPS2P1-201ENST00000434010 821 ntBASIC18.98■□□□□ 0.63
RNF135Q8IUD6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 SART3-203ENST00000546611 1184 ntBASIC18.98■□□□□ 0.63
RNF135Q8IUD6 AC021087.4-201ENST00000563761 564 ntBASIC18.98■□□□□ 0.63
RNF135Q8IUD6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.98■□□□□ 0.63
RNF135Q8IUD6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 AC099343.3-201ENST00000605834 2503 ntBASIC18.98■□□□□ 0.63
RNF135Q8IUD6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF135Q8IUD6 BCL2-203ENST00000589955 5011 ntBASIC18.97■□□□□ 0.63
RNF135Q8IUD6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 MTMR9LP-203ENST00000426597 1545 ntBASIC18.97■□□□□ 0.63
RNF135Q8IUD6 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms