Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 NOC2LP2-201ENST00000407594 1944 ntBASIC11.88□□□□□ -0.51
SCXQ7RTU7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 KRT8P3-201ENST00000519669 1449 ntBASIC11.88□□□□□ -0.51
SCXQ7RTU7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 GRAMD4P1-201ENST00000435181 1110 ntBASIC11.88□□□□□ -0.51
SCXQ7RTU7 DUSP5P1-201ENST00000441325 1139 ntBASIC11.88□□□□□ -0.51
SCXQ7RTU7 SPDYE13P-201ENST00000445314 798 ntBASIC11.88□□□□□ -0.51
SCXQ7RTU7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 AC092597.1-201ENST00000487352 616 ntBASIC11.88□□□□□ -0.51
SCXQ7RTU7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCXQ7RTU7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.88□□□□□ -0.51
SCXQ7RTU7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 CLEC4GP1-201ENST00000596555 870 ntBASIC11.87□□□□□ -0.51
SCXQ7RTU7 AL121894.2-201ENST00000602977 491 ntBASIC11.87□□□□□ -0.51
SCXQ7RTU7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.87□□□□□ -0.51
SCXQ7RTU7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms