Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 FAM220CP-201ENST00000395253 831 ntBASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 AL139288.1-201ENST00000623748 933 ntBASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 CROCCP3-202ENST00000420820 1947 ntBASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
C9orf139Q6ZV77 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
C9orf139Q6ZV77 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
C9orf139Q6ZV77 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
C9orf139Q6ZV77 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
C9orf139Q6ZV77 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 AL031598.1-201ENST00000561511 1773 ntBASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 AC139887.3-201ENST00000568585 713 ntBASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 AL671883.3-201ENST00000603274 991 ntBASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 FAM215A-202ENST00000632077 792 ntBASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 AC099343.3-201ENST00000605834 2503 ntBASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.45□□□□□ -0.1
C9orf139Q6ZV77 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms