Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM88Q6PEY1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 PHGDH-210ENST00000641115 1638 ntBASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM88Q6PEY1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 AC142086.2-201ENST00000569753 217 ntBASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TMEM88Q6PEY1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 FLJ13224-201ENST00000313737 1514 ntBASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 AL512625.2-201ENST00000417533 625 ntBASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 AL603756.1-201ENST00000606511 2163 ntBASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms