Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 AL592071.1-201ENST00000611956 408 ntBASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN20Q4JDL3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 IER3-202ENST00000376377 1350 ntBASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 AL845331.1-201ENST00000424978 1190 ntBASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTPN20Q4JDL3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 AC016734.2-201ENST00000624325 1377 ntBASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 AL358472.4-201ENST00000633140 710 ntBASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN20Q4JDL3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms