Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 CROCCP1-201ENST00000426910 5675 ntBASIC15.74■□□□□ 0.11
SEC61A1P61619 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.73■□□□□ 0.11
SEC61A1P61619 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 AC108860.2-201ENST00000562760 2183 ntBASIC15.73■□□□□ 0.11
SEC61A1P61619 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.73■□□□□ 0.11
SEC61A1P61619 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SEC61A1P61619 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 AC018695.7-201ENST00000624587 2492 ntBASIC15.73■□□□□ 0.11
SEC61A1P61619 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
SEC61A1P61619 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SEC61A1P61619 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SEC61A1P61619 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SEC61A1P61619 AK4P3-201ENST00000418260 669 ntBASIC15.73■□□□□ 0.11
SEC61A1P61619 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.73■□□□□ 0.11
SEC61A1P61619 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.73■□□□□ 0.11
SEC61A1P61619 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.73■□□□□ 0.11
SEC61A1P61619 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.73■□□□□ 0.11
SEC61A1P61619 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.73■□□□□ 0.11
SEC61A1P61619 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.73■□□□□ 0.11
SEC61A1P61619 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
SEC61A1P61619 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SEC61A1P61619 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.73■□□□□ 0.11
SEC61A1P61619 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.73■□□□□ 0.11
SEC61A1P61619 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SEC61A1P61619 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.73■□□□□ 0.11
SEC61A1P61619 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.73■□□□□ 0.11
SEC61A1P61619 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SEC61A1P61619 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.73■□□□□ 0.11
SEC61A1P61619 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SEC61A1P61619 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
SEC61A1P61619 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SEC61A1P61619 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
SEC61A1P61619 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.72■□□□□ 0.11
SEC61A1P61619 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SEC61A1P61619 BX664615.1-201ENST00000443558 458 ntBASIC15.72■□□□□ 0.11
SEC61A1P61619 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SEC61A1P61619 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.72■□□□□ 0.11
SEC61A1P61619 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.72■□□□□ 0.11
SEC61A1P61619 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SEC61A1P61619 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SEC61A1P61619 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.72■□□□□ 0.11
SEC61A1P61619 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.72■□□□□ 0.11
SEC61A1P61619 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SEC61A1P61619 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.71■□□□□ 0.11
SEC61A1P61619 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SEC61A1P61619 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms