Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH13P55290 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH13P55290 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH13P55290 AL157888.1-201ENST00000631930 593 ntBASIC17.57■□□□□ 0.4
CDH13P55290 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH13P55290 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH13P55290 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDH13P55290 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH13P55290 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH13P55290 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH13P55290 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH13P55290 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDH13P55290 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CDH13P55290 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH13P55290 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH13P55290 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH13P55290 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH13P55290 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH13P55290 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDH13P55290 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH13P55290 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.56■□□□□ 0.4
CDH13P55290 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH13P55290 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDH13P55290 AC092865.7-201ENST00000641832 219 ntBASIC17.56■□□□□ 0.4
CDH13P55290 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CDH13P55290 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH13P55290 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH13P55290 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH13P55290 LINC00602-201ENST00000629776 2065 ntBASIC17.56■□□□□ 0.4
CDH13P55290 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH13P55290 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH13P55290 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH13P55290 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH13P55290 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH13P55290 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDH13P55290 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDH13P55290 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH13P55290 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH13P55290 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CDH13P55290 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDH13P55290 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH13P55290 AL512604.3-201ENST00000569583 964 ntBASIC17.55■□□□□ 0.4
CDH13P55290 NEK4P2-201ENST00000580004 1012 ntBASIC17.55■□□□□ 0.4
CDH13P55290 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CDH13P55290 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH13P55290 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH13P55290 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH13P55290 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
CDH13P55290 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH13P55290 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 LINC00167-201ENST00000530583 1419 ntBASIC17.55■□□□□ 0.4
CDH13P55290 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH13P55290 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH13P55290 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CDH13P55290 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH13P55290 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDH13P55290 LINC01568-207ENST00000641790 1380 ntBASIC17.54■□□□□ 0.4
CDH13P55290 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH13P55290 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDH13P55290 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH13P55290 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms