Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
HDGFP51858 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC25.26■■□□□ 1.63
HDGFP51858 AC004877.2-201ENST00000623941 599 ntBASIC25.26■■□□□ 1.63
HDGFP51858 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
HDGFP51858 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
HDGFP51858 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
HDGFP51858 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
HDGFP51858 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HDGFP51858 SIRPAP1-201ENST00000448467 1770 ntBASIC25.26■■□□□ 1.63
HDGFP51858 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
HDGFP51858 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HDGFP51858 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HDGFP51858 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 KLF4P1-201ENST00000412782 1185 ntBASIC25.25■■□□□ 1.63
HDGFP51858 AP000344.2-201ENST00000512987 629 ntBASIC25.25■■□□□ 1.63
HDGFP51858 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC25.25■■□□□ 1.63
HDGFP51858 AL031432.2-201ENST00000566714 459 ntBASIC25.25■■□□□ 1.63
HDGFP51858 AL928711.1-201ENST00000570165 459 ntBASIC25.25■■□□□ 1.63
HDGFP51858 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC25.25■■□□□ 1.63
HDGFP51858 AC093010.1-201ENST00000473625 1624 ntBASIC25.25■■□□□ 1.63
HDGFP51858 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 AC005082.1-201ENST00000413042 2259 ntBASIC25.25■■□□□ 1.63
HDGFP51858 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.25■■□□□ 1.63
HDGFP51858 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HDGFP51858 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 CLDN5-201ENST00000403084 2357 ntBASIC25.24■■□□□ 1.63
HDGFP51858 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 ANO7L1-203ENST00000602586 1720 ntBASIC25.24■■□□□ 1.63
HDGFP51858 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 DDT-204ENST00000404092 805 ntTSL 3 BASIC25.24■■□□□ 1.63
HDGFP51858 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC25.24■■□□□ 1.63
HDGFP51858 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC25.24■■□□□ 1.63
HDGFP51858 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC25.24■■□□□ 1.63
HDGFP51858 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
HDGFP51858 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.24■■□□□ 1.63
HDGFP51858 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HDGFP51858 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC25.24■■□□□ 1.63
HDGFP51858 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 AC148477.5-201ENST00000625164 1645 ntBASIC25.23■■□□□ 1.63
HDGFP51858 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
HDGFP51858 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
HDGFP51858 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
HDGFP51858 IGLL3P-201ENST00000412472 434 ntBASIC25.23■■□□□ 1.63
HDGFP51858 RHOQP3-201ENST00000437982 621 ntBASIC25.23■■□□□ 1.63
HDGFP51858 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 PUS1-205ENST00000535067 838 ntTSL 3 BASIC25.23■■□□□ 1.63
HDGFP51858 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC25.23■■□□□ 1.63
HDGFP51858 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC25.23■■□□□ 1.63
HDGFP51858 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC25.23■■□□□ 1.63
HDGFP51858 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC25.23■■□□□ 1.63
HDGFP51858 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC25.23■■□□□ 1.63
HDGFP51858 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HDGFP51858 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
HDGFP51858 FUT8-AS1-201ENST00000621019 1521 ntBASIC25.22■■□□□ 1.63
HDGFP51858 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
HDGFP51858 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HDGFP51858 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC25.22■■□□□ 1.63
HDGFP51858 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HDGFP51858 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC25.22■■□□□ 1.63
HDGFP51858 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC25.22■■□□□ 1.63
HDGFP51858 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.22■■□□□ 1.63
HDGFP51858 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC25.22■■□□□ 1.63
HDGFP51858 AC106028.4-201ENST00000614509 607 ntBASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms