Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6CP51160 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6CP51160 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6CP51160 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.4■□□□□ 0.7
PDE6CP51160 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.4■□□□□ 0.7
PDE6CP51160 AC092597.1-201ENST00000487352 616 ntBASIC19.4■□□□□ 0.7
PDE6CP51160 KRT18P56-201ENST00000507275 550 ntBASIC19.4■□□□□ 0.7
PDE6CP51160 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.4■□□□□ 0.7
PDE6CP51160 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.4■□□□□ 0.7
PDE6CP51160 AL136038.4-201ENST00000603606 1261 ntBASIC19.4■□□□□ 0.7
PDE6CP51160 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE6CP51160 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE6CP51160 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6CP51160 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6CP51160 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6CP51160 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PDE6CP51160 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PDE6CP51160 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6CP51160 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PDE6CP51160 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDE6CP51160 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
PDE6CP51160 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 OR6D1P-202ENST00000641007 5290 ntBASIC19.39■□□□□ 0.69
PDE6CP51160 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 AC067852.2-201ENST00000590513 2313 ntBASIC19.39■□□□□ 0.69
PDE6CP51160 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PDE6CP51160 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.39■□□□□ 0.69
PDE6CP51160 SPDYE13P-201ENST00000445314 798 ntBASIC19.39■□□□□ 0.69
PDE6CP51160 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PDE6CP51160 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.39■□□□□ 0.69
PDE6CP51160 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.39■□□□□ 0.69
PDE6CP51160 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDE6CP51160 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PDE6CP51160 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6CP51160 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6CP51160 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PDE6CP51160 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6CP51160 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PDE6CP51160 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PDE6CP51160 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDE6CP51160 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PDE6CP51160 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
PDE6CP51160 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE6CP51160 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE6CP51160 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 HLA-F-220ENST00000434407 884 ntBASIC19.38■□□□□ 0.69
PDE6CP51160 HCG4P8-203ENST00000443049 980 ntBASIC19.38■□□□□ 0.69
PDE6CP51160 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
PDE6CP51160 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE6CP51160 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE6CP51160 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE6CP51160 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE6CP51160 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDE6CP51160 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDE6CP51160 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6CP51160 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE6CP51160 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
PDE6CP51160 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PDE6CP51160 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PDE6CP51160 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6CP51160 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.37■□□□□ 0.69
PDE6CP51160 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6CP51160 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6CP51160 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6CP51160 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PDE6CP51160 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6CP51160 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms