Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC9A3P48764 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 TSPY14P-201ENST00000303979 915 ntBASIC16.49■□□□□ 0.23
SLC9A3P48764 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC9A3P48764 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 MST1L-201ENST00000442552 2185 ntBASIC16.49■□□□□ 0.23
SLC9A3P48764 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC9A3P48764 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC9A3P48764 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC9A3P48764 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC9A3P48764 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC9A3P48764 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC9A3P48764 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
SLC9A3P48764 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SLC9A3P48764 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC9A3P48764 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC9A3P48764 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC9A3P48764 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC9A3P48764 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SLC9A3P48764 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
SLC9A3P48764 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 AC080080.1-201ENST00000625121 2420 ntBASIC16.48■□□□□ 0.23
SLC9A3P48764 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC9A3P48764 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC9A3P48764 MIR1238-201ENST00000408483 83 ntBASIC16.48■□□□□ 0.23
SLC9A3P48764 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC9A3P48764 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC9A3P48764 AC128688.1-201ENST00000487626 519 ntBASIC16.48■□□□□ 0.23
SLC9A3P48764 EGLN1P1-201ENST00000531623 762 ntBASIC16.48■□□□□ 0.23
SLC9A3P48764 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC9A3P48764 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC9A3P48764 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SLC9A3P48764 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC9A3P48764 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SLC9A3P48764 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC9A3P48764 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC9A3P48764 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC9A3P48764 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC9A3P48764 FER1L4-210ENST00000615531 5998 ntBASIC16.48■□□□□ 0.23
SLC9A3P48764 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SLC9A3P48764 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC9A3P48764 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC9A3P48764 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC9A3P48764 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SLC9A3P48764 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC9A3P48764 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC9A3P48764 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC9A3P48764 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC9A3P48764 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC9A3P48764 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC9A3P48764 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC9A3P48764 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC9A3P48764 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.47■□□□□ 0.23
SLC9A3P48764 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC9A3P48764 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SLC9A3P48764 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC9A3P48764 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC9A3P48764 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SLC9A3P48764 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC9A3P48764 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC9A3P48764 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms