Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.81■□□□□ 0.12
THBS4P35443 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.81■□□□□ 0.12
THBS4P35443 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.81■□□□□ 0.12
THBS4P35443 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.81■□□□□ 0.12
THBS4P35443 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
THBS4P35443 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
THBS4P35443 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.81■□□□□ 0.12
THBS4P35443 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.81■□□□□ 0.12
THBS4P35443 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
THBS4P35443 AC093458.2-201ENST00000623150 629 ntBASIC15.81■□□□□ 0.12
THBS4P35443 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
THBS4P35443 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
THBS4P35443 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
THBS4P35443 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
THBS4P35443 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.8■□□□□ 0.12
THBS4P35443 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
THBS4P35443 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS4P35443 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS4P35443 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
THBS4P35443 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS4P35443 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS4P35443 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
THBS4P35443 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.8■□□□□ 0.12
THBS4P35443 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.8■□□□□ 0.12
THBS4P35443 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
THBS4P35443 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.8■□□□□ 0.12
THBS4P35443 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
THBS4P35443 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
THBS4P35443 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
THBS4P35443 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THBS4P35443 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.79■□□□□ 0.12
THBS4P35443 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 AC134043.2-201ENST00000624206 2238 ntBASIC15.79■□□□□ 0.12
THBS4P35443 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS4P35443 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS4P35443 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
THBS4P35443 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.79■□□□□ 0.12
THBS4P35443 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.79■□□□□ 0.12
THBS4P35443 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS4P35443 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 AC011498.5-201ENST00000592027 486 ntBASIC15.79■□□□□ 0.12
THBS4P35443 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
THBS4P35443 AC069148.1-201ENST00000608741 768 ntBASIC15.79■□□□□ 0.12
THBS4P35443 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
THBS4P35443 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 AC099343.3-201ENST00000605834 2503 ntBASIC15.79■□□□□ 0.12
THBS4P35443 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.79■□□□□ 0.12
THBS4P35443 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.79■□□□□ 0.12
THBS4P35443 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.79■□□□□ 0.12
THBS4P35443 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THBS4P35443 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.78■□□□□ 0.12
THBS4P35443 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
THBS4P35443 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS4P35443 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms