Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 AC092474.2-201ENST00000424288 719 ntBASIC20.1■□□□□ 0.81
CTGFP29279 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.1■□□□□ 0.81
CTGFP29279 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.1■□□□□ 0.81
CTGFP29279 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.1■□□□□ 0.81
CTGFP29279 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.1■□□□□ 0.81
CTGFP29279 MIR4745-201ENST00000577608 62 ntBASIC20.1■□□□□ 0.81
CTGFP29279 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.1■□□□□ 0.81
CTGFP29279 ESPNP-201ENST00000270691 2015 ntBASIC20.1■□□□□ 0.81
CTGFP29279 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTGFP29279 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.1■□□□□ 0.81
CTGFP29279 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 GMCL1P1-201ENST00000463439 1581 ntBASIC20.09■□□□□ 0.81
CTGFP29279 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.09■□□□□ 0.81
CTGFP29279 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.09■□□□□ 0.81
CTGFP29279 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.09■□□□□ 0.81
CTGFP29279 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.09■□□□□ 0.81
CTGFP29279 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.09■□□□□ 0.81
CTGFP29279 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.09■□□□□ 0.81
CTGFP29279 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.09■□□□□ 0.81
CTGFP29279 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTGFP29279 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
CTGFP29279 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.08■□□□□ 0.81
CTGFP29279 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTGFP29279 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTGFP29279 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CTGFP29279 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTGFP29279 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.08■□□□□ 0.81
CTGFP29279 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTGFP29279 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTGFP29279 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTGFP29279 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.08■□□□□ 0.81
CTGFP29279 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CTGFP29279 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTGFP29279 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTGFP29279 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.08■□□□□ 0.81
CTGFP29279 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTGFP29279 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
CTGFP29279 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTGFP29279 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.08■□□□□ 0.8
CTGFP29279 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.08■□□□□ 0.8
CTGFP29279 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTGFP29279 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTGFP29279 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTGFP29279 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CTGFP29279 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTGFP29279 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.07■□□□□ 0.8
CTGFP29279 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CTGFP29279 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTGFP29279 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.07■□□□□ 0.8
CTGFP29279 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.07■□□□□ 0.8
CTGFP29279 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.07■□□□□ 0.8
CTGFP29279 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.07■□□□□ 0.8
CTGFP29279 AC093520.2-201ENST00000561830 333 ntBASIC20.07■□□□□ 0.8
CTGFP29279 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.07■□□□□ 0.8
CTGFP29279 AC022145.2-201ENST00000598203 171 ntBASIC20.07■□□□□ 0.8
CTGFP29279 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTGFP29279 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTGFP29279 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTGFP29279 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.07■□□□□ 0.8
CTGFP29279 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTGFP29279 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTGFP29279 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTGFP29279 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTGFP29279 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.06■□□□□ 0.8
CTGFP29279 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTGFP29279 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTGFP29279 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTGFP29279 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTGFP29279 KLF4P1-201ENST00000412782 1185 ntBASIC20.06■□□□□ 0.8
CTGFP29279 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.06■□□□□ 0.8
CTGFP29279 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.06■□□□□ 0.8
CTGFP29279 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.06■□□□□ 0.8
CTGFP29279 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTGFP29279 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.06■□□□□ 0.8
CTGFP29279 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.06■□□□□ 0.8
CTGFP29279 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.06■□□□□ 0.8
CTGFP29279 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.06■□□□□ 0.8
CTGFP29279 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.06■□□□□ 0.8
CTGFP29279 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTGFP29279 AC019129.2-201ENST00000609837 1235 ntBASIC20.06■□□□□ 0.8
CTGFP29279 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.06■□□□□ 0.8
CTGFP29279 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTGFP29279 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CTGFP29279 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms