Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GDF1P27539 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
GDF1P27539 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
GDF1P27539 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.25■□□□□ 0.19
GDF1P27539 FAAHP1-202ENST00000446499 1238 ntBASIC16.25■□□□□ 0.19
GDF1P27539 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 EMBP1-201ENST00000458200 901 ntBASIC16.25■□□□□ 0.19
GDF1P27539 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.25■□□□□ 0.19
GDF1P27539 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.25■□□□□ 0.19
GDF1P27539 AC114341.1-201ENST00000618070 349 ntBASIC16.25■□□□□ 0.19
GDF1P27539 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GDF1P27539 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.25■□□□□ 0.19
GDF1P27539 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.25■□□□□ 0.19
GDF1P27539 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.25■□□□□ 0.19
GDF1P27539 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.25■□□□□ 0.19
GDF1P27539 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GDF1P27539 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.24■□□□□ 0.19
GDF1P27539 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 TP73-AS1-210ENST00000637775 1455 ntBASIC16.24■□□□□ 0.19
GDF1P27539 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
GDF1P27539 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.24■□□□□ 0.19
GDF1P27539 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.24■□□□□ 0.19
GDF1P27539 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
GDF1P27539 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.24■□□□□ 0.19
GDF1P27539 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.24■□□□□ 0.19
GDF1P27539 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.24■□□□□ 0.19
GDF1P27539 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 AL138831.2-201ENST00000606564 490 ntBASIC16.24■□□□□ 0.19
GDF1P27539 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.24■□□□□ 0.19
GDF1P27539 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.24■□□□□ 0.19
GDF1P27539 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
GDF1P27539 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 AC104581.1-202ENST00000635932 2618 ntBASIC16.24■□□□□ 0.19
GDF1P27539 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.24■□□□□ 0.19
GDF1P27539 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GDF1P27539 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDF1P27539 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.23■□□□□ 0.19
GDF1P27539 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.23■□□□□ 0.19
GDF1P27539 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
GDF1P27539 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.23■□□□□ 0.19
GDF1P27539 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 AC125634.1-201ENST00000438758 1403 ntBASIC16.23■□□□□ 0.19
GDF1P27539 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms