Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 AC096733.2-201ENST00000609937 1394 ntBASIC16.17■□□□□ 0.18
HLA-DPB1P04440 AL121761.2-201ENST00000598007 1648 ntBASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 MIR1238-201ENST00000408483 83 ntBASIC16.17■□□□□ 0.18
HLA-DPB1P04440 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 AC011676.5-201ENST00000624864 2660 ntBASIC16.16■□□□□ 0.18
HLA-DPB1P04440 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 LINC00602-201ENST00000629776 2065 ntBASIC16.16■□□□□ 0.18
HLA-DPB1P04440 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DPB1P04440 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 AL109659.2-201ENST00000606809 1674 ntBASIC16.15■□□□□ 0.18
HLA-DPB1P04440 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPB1P04440 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms