Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 AC010240.3-201ENST00000607688 395 ntBASIC16.15■□□□□ 0.18
HLA-DQA2P01906 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 AC012317.2-201ENST00000623305 2251 ntBASIC16.15■□□□□ 0.18
HLA-DQA2P01906 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-DQA2P01906 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 AL512604.3-201ENST00000569583 964 ntBASIC16.14■□□□□ 0.17
HLA-DQA2P01906 MIR3180-4-201ENST00000582223 153 ntBASIC16.14■□□□□ 0.17
HLA-DQA2P01906 AC024243.1-201ENST00000609234 778 ntBASIC16.14■□□□□ 0.17
HLA-DQA2P01906 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQA2P01906 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 LINC00896-202ENST00000609602 2128 ntBASIC16.13■□□□□ 0.17
HLA-DQA2P01906 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 AC093010.1-201ENST00000473625 1624 ntBASIC16.13■□□□□ 0.17
HLA-DQA2P01906 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 MMP23A-201ENST00000234610 1017 ntBASIC16.13■□□□□ 0.17
HLA-DQA2P01906 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 INGX-201ENST00000359239 846 ntBASIC16.13■□□□□ 0.17
HLA-DQA2P01906 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 AC009947.2-201ENST00000444014 672 ntBASIC16.13■□□□□ 0.17
HLA-DQA2P01906 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 CYP2D8P-201ENST00000433633 1490 ntBASIC16.13■□□□□ 0.17
HLA-DQA2P01906 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms