Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSPG5O95196 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSPG5O95196 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSPG5O95196 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CSPG5O95196 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
CSPG5O95196 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSPG5O95196 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSPG5O95196 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSPG5O95196 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSPG5O95196 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSPG5O95196 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.24■□□□□ 0.67
CSPG5O95196 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.24■□□□□ 0.67
CSPG5O95196 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
CSPG5O95196 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CSPG5O95196 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.23■□□□□ 0.67
CSPG5O95196 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 RPSAP43-201ENST00000402237 625 ntBASIC19.23■□□□□ 0.67
CSPG5O95196 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.23■□□□□ 0.67
CSPG5O95196 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.23■□□□□ 0.67
CSPG5O95196 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
CSPG5O95196 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.23■□□□□ 0.67
CSPG5O95196 AC145285.3-201ENST00000564603 959 ntBASIC19.23■□□□□ 0.67
CSPG5O95196 AL138831.2-201ENST00000606564 490 ntBASIC19.23■□□□□ 0.67
CSPG5O95196 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.23■□□□□ 0.67
CSPG5O95196 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.23■□□□□ 0.67
CSPG5O95196 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.23■□□□□ 0.67
CSPG5O95196 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CSPG5O95196 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CSPG5O95196 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.23■□□□□ 0.67
CSPG5O95196 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSPG5O95196 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.22■□□□□ 0.67
CSPG5O95196 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.22■□□□□ 0.67
CSPG5O95196 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.22■□□□□ 0.67
CSPG5O95196 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 YBX2P1-201ENST00000394192 760 ntBASIC19.22■□□□□ 0.67
CSPG5O95196 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 ABCD1P5-201ENST00000445663 754 ntBASIC19.22■□□□□ 0.67
CSPG5O95196 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CSPG5O95196 AC112482.1-201ENST00000492080 688 ntBASIC19.22■□□□□ 0.67
CSPG5O95196 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.22■□□□□ 0.67
CSPG5O95196 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.22■□□□□ 0.67
CSPG5O95196 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.22■□□□□ 0.67
CSPG5O95196 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.22■□□□□ 0.67
CSPG5O95196 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.22■□□□□ 0.67
CSPG5O95196 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.22■□□□□ 0.67
CSPG5O95196 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.22■□□□□ 0.67
CSPG5O95196 FAM197Y3-203ENST00000618346 717 ntBASIC19.22■□□□□ 0.67
CSPG5O95196 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.22■□□□□ 0.67
CSPG5O95196 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.22■□□□□ 0.67
CSPG5O95196 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.22■□□□□ 0.67
CSPG5O95196 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
CSPG5O95196 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSPG5O95196 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.21■□□□□ 0.67
CSPG5O95196 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.21■□□□□ 0.67
CSPG5O95196 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.21■□□□□ 0.67
CSPG5O95196 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.21■□□□□ 0.67
CSPG5O95196 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.21■□□□□ 0.67
CSPG5O95196 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.21■□□□□ 0.67
CSPG5O95196 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.21■□□□□ 0.67
CSPG5O95196 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 MIR3687-2-201ENST00000577708 61 ntBASIC19.21■□□□□ 0.67
CSPG5O95196 AP001160.2-201ENST00000596071 487 ntBASIC19.21■□□□□ 0.67
CSPG5O95196 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CSPG5O95196 MIR3687-1-201ENST00000614492 61 ntBASIC19.21■□□□□ 0.67
CSPG5O95196 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.21■□□□□ 0.67
CSPG5O95196 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CSPG5O95196 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.21■□□□□ 0.67
CSPG5O95196 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms