Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
BEST1O76090 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
BEST1O76090 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.82■□□□□ 0.6
BEST1O76090 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST1O76090 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BEST1O76090 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.81■□□□□ 0.6
BEST1O76090 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.81■□□□□ 0.6
BEST1O76090 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
BEST1O76090 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.81■□□□□ 0.6
BEST1O76090 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BEST1O76090 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.81■□□□□ 0.6
BEST1O76090 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
BEST1O76090 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 AC096633.1-201ENST00000422446 749 ntBASIC18.81■□□□□ 0.6
BEST1O76090 AC007967.3-201ENST00000434308 558 ntBASIC18.81■□□□□ 0.6
BEST1O76090 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.81■□□□□ 0.6
BEST1O76090 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BEST1O76090 AC114341.1-201ENST00000618070 349 ntBASIC18.81■□□□□ 0.6
BEST1O76090 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.81■□□□□ 0.6
BEST1O76090 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BEST1O76090 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 AC009949.1-201ENST00000623048 1830 ntBASIC18.81■□□□□ 0.6
BEST1O76090 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.81■□□□□ 0.6
BEST1O76090 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BEST1O76090 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
BEST1O76090 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST1O76090 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
BEST1O76090 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST1O76090 INTS4P1-201ENST00000438455 1935 ntBASIC18.8■□□□□ 0.6
BEST1O76090 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST1O76090 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST1O76090 AC097374.2-201ENST00000618617 1306 ntBASIC18.8■□□□□ 0.6
BEST1O76090 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST1O76090 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST1O76090 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BEST1O76090 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST1O76090 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST1O76090 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.8■□□□□ 0.6
BEST1O76090 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST1O76090 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST1O76090 KRT16P4-201ENST00000453883 522 ntBASIC18.8■□□□□ 0.6
BEST1O76090 EMBP1-201ENST00000458200 901 ntBASIC18.8■□□□□ 0.6
BEST1O76090 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.8■□□□□ 0.6
BEST1O76090 RN7SL510P-201ENST00000581311 263 ntBASIC18.8■□□□□ 0.6
BEST1O76090 AC011467.2-201ENST00000598425 242 ntBASIC18.8■□□□□ 0.6
BEST1O76090 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST1O76090 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.8■□□□□ 0.6
BEST1O76090 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BEST1O76090 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BEST1O76090 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST1O76090 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BEST1O76090 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
BEST1O76090 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST1O76090 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST1O76090 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.79■□□□□ 0.6
BEST1O76090 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST1O76090 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.79■□□□□ 0.6
BEST1O76090 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.79■□□□□ 0.6
BEST1O76090 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.79■□□□□ 0.6
BEST1O76090 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST1O76090 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST1O76090 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
BEST1O76090 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 KRT18P55-202ENST00000578578 1546 ntBASIC18.79■□□□□ 0.6
BEST1O76090 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms