Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT3O75175 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT3O75175 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CNOT3O75175 AC016734.2-201ENST00000624325 1377 ntBASIC17.42■□□□□ 0.38
CNOT3O75175 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CNOT3O75175 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT3O75175 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CNOT3O75175 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CNOT3O75175 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CNOT3O75175 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT3O75175 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.42■□□□□ 0.38
CNOT3O75175 RNF126P1-202ENST00000569893 925 ntBASIC17.42■□□□□ 0.38
CNOT3O75175 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CNOT3O75175 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.42■□□□□ 0.38
CNOT3O75175 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT3O75175 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT3O75175 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT3O75175 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT3O75175 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT3O75175 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT3O75175 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.41■□□□□ 0.38
CNOT3O75175 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CNOT3O75175 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CNOT3O75175 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CNOT3O75175 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.41■□□□□ 0.38
CNOT3O75175 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT3O75175 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CNOT3O75175 KRT18P48-201ENST00000434763 852 ntBASIC17.41■□□□□ 0.38
CNOT3O75175 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT3O75175 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 CLEC4GP1-201ENST00000596555 870 ntBASIC17.41■□□□□ 0.38
CNOT3O75175 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 AC092119.3-201ENST00000612618 583 ntBASIC17.41■□□□□ 0.38
CNOT3O75175 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT3O75175 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.41■□□□□ 0.38
CNOT3O75175 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT3O75175 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT3O75175 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CNOT3O75175 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT3O75175 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CNOT3O75175 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT3O75175 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CNOT3O75175 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT3O75175 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT3O75175 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT3O75175 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.4■□□□□ 0.38
CNOT3O75175 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT3O75175 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.4■□□□□ 0.38
CNOT3O75175 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.4■□□□□ 0.38
CNOT3O75175 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT3O75175 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 AC012313.10-201ENST00000623509 926 ntBASIC17.4■□□□□ 0.38
CNOT3O75175 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CNOT3O75175 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CNOT3O75175 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms