Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.72■■□□□ 1.07
GRIN3BO60391 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.72■■□□□ 1.07
GRIN3BO60391 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
GRIN3BO60391 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.72■■□□□ 1.07
GRIN3BO60391 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.72■■□□□ 1.07
GRIN3BO60391 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.72■■□□□ 1.07
GRIN3BO60391 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.72■■□□□ 1.07
GRIN3BO60391 ADH5P3-201ENST00000433842 1137 ntBASIC21.72■■□□□ 1.07
GRIN3BO60391 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.72■■□□□ 1.07
GRIN3BO60391 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
GRIN3BO60391 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.72■■□□□ 1.07
GRIN3BO60391 SPDYE22P-201ENST00000582158 798 ntBASIC21.72■■□□□ 1.07
GRIN3BO60391 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.72■■□□□ 1.07
GRIN3BO60391 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 AC026120.1-201ENST00000611536 926 ntBASIC21.72■■□□□ 1.07
GRIN3BO60391 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
GRIN3BO60391 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
GRIN3BO60391 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
GRIN3BO60391 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
GRIN3BO60391 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.72■■□□□ 1.07
GRIN3BO60391 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GRIN3BO60391 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 AC096633.1-201ENST00000422446 749 ntBASIC21.71■■□□□ 1.07
GRIN3BO60391 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.71■■□□□ 1.07
GRIN3BO60391 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.71■■□□□ 1.07
GRIN3BO60391 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.71■■□□□ 1.07
GRIN3BO60391 RN7SL692P-201ENST00000464677 288 ntBASIC21.71■■□□□ 1.07
GRIN3BO60391 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.71■■□□□ 1.07
GRIN3BO60391 AC140878.1-201ENST00000565277 250 ntBASIC21.71■■□□□ 1.07
GRIN3BO60391 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.71■■□□□ 1.07
GRIN3BO60391 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.71■■□□□ 1.07
GRIN3BO60391 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 AP001059.3-201ENST00000619053 235 ntBASIC21.71■■□□□ 1.07
GRIN3BO60391 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.71■■□□□ 1.07
GRIN3BO60391 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
GRIN3BO60391 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.71■■□□□ 1.07
GRIN3BO60391 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
GRIN3BO60391 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRIN3BO60391 AL353593.2-201ENST00000602529 1483 ntBASIC21.71■■□□□ 1.07
GRIN3BO60391 MTMR9LP-203ENST00000426597 1545 ntBASIC21.7■■□□□ 1.07
GRIN3BO60391 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.7■■□□□ 1.06
GRIN3BO60391 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GRIN3BO60391 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GRIN3BO60391 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GRIN3BO60391 PIN1P1-201ENST00000412108 996 ntBASIC21.7■■□□□ 1.06
GRIN3BO60391 KRT17P7-201ENST00000451704 1104 ntBASIC21.7■■□□□ 1.06
GRIN3BO60391 FAM86C2P-203ENST00000528684 1004 ntBASIC21.7■■□□□ 1.06
GRIN3BO60391 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.7■■□□□ 1.06
GRIN3BO60391 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
GRIN3BO60391 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GRIN3BO60391 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
GRIN3BO60391 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
GRIN3BO60391 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
GRIN3BO60391 FO538757.1-201ENST00000623083 1397 ntBASIC21.7■■□□□ 1.06
GRIN3BO60391 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.7■■□□□ 1.06
GRIN3BO60391 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.7■■□□□ 1.06
GRIN3BO60391 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GRIN3BO60391 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GRIN3BO60391 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.7■■□□□ 1.06
GRIN3BO60391 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
GRIN3BO60391 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
GRIN3BO60391 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.69■■□□□ 1.06
GRIN3BO60391 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.69■■□□□ 1.06
GRIN3BO60391 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.69■■□□□ 1.06
GRIN3BO60391 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.69■■□□□ 1.06
GRIN3BO60391 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.69■■□□□ 1.06
GRIN3BO60391 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 AC125807.1-201ENST00000483097 614 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms