Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 AL645929.1-201ENST00000420084 975 ntBASIC15.87■□□□□ 0.13
NPIPB4C9JG80 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPB4C9JG80 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 REXO1L11P-201ENST00000620964 1927 ntBASIC15.86■□□□□ 0.13
NPIPB4C9JG80 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 TMPOP1-202ENST00000424642 1267 ntBASIC15.86■□□□□ 0.13
NPIPB4C9JG80 AL136038.3-201ENST00000561909 1096 ntBASIC15.86■□□□□ 0.13
NPIPB4C9JG80 RNF126P1-202ENST00000569893 925 ntBASIC15.86■□□□□ 0.13
NPIPB4C9JG80 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 AL353801.3-201ENST00000609898 542 ntBASIC15.86■□□□□ 0.13
NPIPB4C9JG80 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPIPB4C9JG80 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms