Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 AC006015.1-201ENST00000429970 570 ntBASIC12.78□□□□□ -0.36
LINC01549A6NIU2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.78□□□□□ -0.36
LINC01549A6NIU2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 AC009102.3-201ENST00000623118 1491 ntBASIC12.78□□□□□ -0.36
LINC01549A6NIU2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
LINC01549A6NIU2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 MIR149-201ENST00000384879 89 ntBASIC12.77□□□□□ -0.37
LINC01549A6NIU2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 TSPY26P-202ENST00000565928 3884 ntBASIC12.77□□□□□ -0.37
LINC01549A6NIU2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01549A6NIU2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms