Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 CYP2D8P-201ENST00000433633 1490 ntBASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.07■□□□□ 0.48
TCRBV9S1A1TA0A576 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 HLA-J-201ENST00000462773 1622 ntBASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV9S1A1TA0A576 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 AC009949.1-201ENST00000623048 1830 ntBASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms