Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB2Q9Y5E7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB2Q9Y5E7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB2Q9Y5E7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 KRT18P65-201ENST00000439811 1286 ntBASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 AF238378.1-201ENST00000526806 358 ntBASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 GMCL1P1-201ENST00000463439 1581 ntBASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB2Q9Y5E7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB2Q9Y5E7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 AC007613.1-201ENST00000572811 2597 ntBASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 TP73-AS1-210ENST00000637775 1455 ntBASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 RCN1P2-201ENST00000398357 915 ntBASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
PCDHB2Q9Y5E7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB2Q9Y5E7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms