Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 AC135776.1-201ENST00000319817 2481 ntBASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 AC009078.2-202ENST00000463353 338 ntBASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 DUTP2-201ENST00000519164 463 ntBASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 AP002469.2-201ENST00000531724 424 ntBASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 INTS4P1-201ENST00000438455 1935 ntBASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00588Q9Y4M8 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.27□□□□□ -0.44
LINC00588Q9Y4M8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00588Q9Y4M8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00588Q9Y4M8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00588Q9Y4M8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
LINC00588Q9Y4M8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00588Q9Y4M8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.27□□□□□ -0.44
LINC00588Q9Y4M8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00588Q9Y4M8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00588Q9Y4M8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms