Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 PCDHA12-202ENST00000613593 2588 ntBASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 SEC1P-202ENST00000473944 940 ntBASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 AL355075.4-201ENST00000554988 638 ntBASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 TNRC18P3-201ENST00000441896 2691 ntBASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 PRORSD1P-202ENST00000563365 2154 ntBASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2BQ9UQN3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 AC009053.2-201ENST00000563701 2365 ntBASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 AC024243.1-201ENST00000609234 778 ntBASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 AC010653.2-201ENST00000623505 997 ntBASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHMP2BQ9UQN3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 AC011270.2-201ENST00000624293 2550 ntBASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms