Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DNMT3BQ9UBC3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 AC126763.1-201ENST00000552015 2118 ntBASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 AC105339.3-201ENST00000560043 636 ntBASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 AL356488.2-201ENST00000602755 427 ntBASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 Z83851.2-201ENST00000609564 659 ntBASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 FAM197Y3-203ENST00000618346 717 ntBASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
DNMT3BQ9UBC3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 AP002414.3-201ENST00000589352 1468 ntBASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 MED15P5-201ENST00000423150 992 ntBASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
DNMT3BQ9UBC3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 AL138781.2-201ENST00000617896 1843 ntBASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 AC073592.3-201ENST00000625118 1834 ntBASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 AC010460.3-201ENST00000511359 1579 ntBASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 AC096633.1-201ENST00000422446 749 ntBASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.65■□□□□ 0.58
DNMT3BQ9UBC3 BX005266.1-201ENST00000473402 457 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms