Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 AC138028.4-201ENST00000564984 1845 ntBASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 ESPNP-201ENST00000270691 2015 ntBASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 KRT18P41-201ENST00000518924 1277 ntBASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 AL136038.4-201ENST00000603606 1261 ntBASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKIPSDQ9NZQ3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 HOXB1-202ENST00000577092 1414 ntBASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKIPSDQ9NZQ3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 AC016734.2-201ENST00000624325 1377 ntBASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 MIR662-201ENST00000384847 95 ntBASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 CHCHD2P8-201ENST00000429873 447 ntBASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 GNAS-203ENST00000306120 1878 ntBASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKIPSDQ9NZQ3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms