Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 RPS2P28-201ENST00000314255 741 ntBASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FBXO28Q9NVF7 AC018445.3-201ENST00000624177 1945 ntBASIC20.58■□□□□ 0.88
FBXO28Q9NVF7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO28Q9NVF7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.58■□□□□ 0.88
FBXO28Q9NVF7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO28Q9NVF7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO28Q9NVF7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
FBXO28Q9NVF7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO28Q9NVF7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.58■□□□□ 0.88
FBXO28Q9NVF7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO28Q9NVF7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 AC087289.5-201ENST00000586076 3175 ntBASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 HLA-J-201ENST00000462773 1622 ntBASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 AC098831.1-202ENST00000438821 336 ntBASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
FBXO28Q9NVF7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 AC104109.2-201ENST00000602919 1418 ntBASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 AD001527.2-201ENST00000622994 785 ntBASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 AC079776.2-201ENST00000641154 1609 ntBASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 AP002414.3-201ENST00000589352 1468 ntBASIC20.56■□□□□ 0.88
FBXO28Q9NVF7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 AC100803.2-201ENST00000562459 1963 ntBASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 SIRPAP1-201ENST00000448467 1770 ntBASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 AC122714.2-201ENST00000502787 707 ntBASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.55■□□□□ 0.88
FBXO28Q9NVF7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms