Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 AC009065.1-201ENST00000564055 1225 ntBASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 AC073592.3-201ENST00000625118 1834 ntBASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 AC141586.5-201ENST00000624546 2050 ntBASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 AC009102.3-201ENST00000623118 1491 ntBASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 AL121956.5-201ENST00000625261 221 ntBASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN3Q9NQS3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 SDHAP2-201ENST00000455183 2001 ntBASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN3Q9NQS3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 GNAS-203ENST00000306120 1878 ntBASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms