Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 AC004877.2-201ENST00000623941 599 ntBASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 AL499627.1-201ENST00000569373 2188 ntBASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 AC092474.2-201ENST00000424288 719 ntBASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 AC010654.1-201ENST00000615722 808 ntBASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ZFYVE28Q9HCC9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 AL139400.1-201ENST00000366220 510 ntBASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 BCAR1-209ENST00000546196 1340 ntBASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 AC096734.2-201ENST00000562054 433 ntBASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ZFYVE28Q9HCC9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
ZFYVE28Q9HCC9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ZFYVE28Q9HCC9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.39■□□□□ 0.86
ZFYVE28Q9HCC9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.39■□□□□ 0.86
ZFYVE28Q9HCC9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
ZFYVE28Q9HCC9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.39■□□□□ 0.86
ZFYVE28Q9HCC9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZFYVE28Q9HCC9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZFYVE28Q9HCC9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZFYVE28Q9HCC9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 MRPL20P1-201ENST00000400819 433 ntBASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 IGLL3P-201ENST00000412472 434 ntBASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 FAM58CP-201ENST00000435741 640 ntBASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms