Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 NOC2LP1-202ENST00000452600 2235 ntBASIC19.17■□□□□ 0.66
SYNCQ9H7C4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SYNCQ9H7C4 LINC01311-201ENST00000565162 1445 ntBASIC19.17■□□□□ 0.66
SYNCQ9H7C4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 FAM210CP-201ENST00000445714 574 ntBASIC19.16■□□□□ 0.66
SYNCQ9H7C4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 AL049597.2-201ENST00000565575 961 ntBASIC19.16■□□□□ 0.66
SYNCQ9H7C4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNCQ9H7C4 FLJ13224-201ENST00000313737 1514 ntBASIC19.15■□□□□ 0.66
SYNCQ9H7C4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 CROCCP1-201ENST00000426910 5675 ntBASIC19.15■□□□□ 0.66
SYNCQ9H7C4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 HLA-F-220ENST00000434407 884 ntBASIC19.15■□□□□ 0.66
SYNCQ9H7C4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 PCDHB18P-201ENST00000524813 2368 ntBASIC19.15■□□□□ 0.66
SYNCQ9H7C4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNCQ9H7C4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SYNCQ9H7C4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SYNCQ9H7C4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
SYNCQ9H7C4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 LINC00602-201ENST00000629776 2065 ntBASIC19.14■□□□□ 0.65
SYNCQ9H7C4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 HBZP1-201ENST00000354915 429 ntBASIC19.14■□□□□ 0.65
SYNCQ9H7C4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNCQ9H7C4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms