Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.51■□□□□ 0.39
PKP4Q99569 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
PKP4Q99569 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PKP4Q99569 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.51■□□□□ 0.39
PKP4Q99569 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PKP4Q99569 NOC2LP2-201ENST00000407594 1944 ntBASIC17.51■□□□□ 0.39
PKP4Q99569 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PKP4Q99569 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP4Q99569 AC022898.2-201ENST00000616822 1312 ntBASIC17.5■□□□□ 0.39
PKP4Q99569 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.5■□□□□ 0.39
PKP4Q99569 PCED1CP-201ENST00000419887 785 ntBASIC17.5■□□□□ 0.39
PKP4Q99569 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP4Q99569 TSPY22P-201ENST00000427496 604 ntBASIC17.5■□□□□ 0.39
PKP4Q99569 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PKP4Q99569 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP4Q99569 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP4Q99569 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.5■□□□□ 0.39
PKP4Q99569 AC009154.2-201ENST00000621177 724 ntBASIC17.5■□□□□ 0.39
PKP4Q99569 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.5■□□□□ 0.39
PKP4Q99569 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP4Q99569 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PKP4Q99569 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.5■□□□□ 0.39
PKP4Q99569 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP4Q99569 AC100803.2-201ENST00000562459 1963 ntBASIC17.49■□□□□ 0.39
PKP4Q99569 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PKP4Q99569 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.49■□□□□ 0.39
PKP4Q99569 LETM1P2-201ENST00000597330 2178 ntBASIC17.49■□□□□ 0.39
PKP4Q99569 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PKP4Q99569 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 KRT18P55-202ENST00000578578 1546 ntBASIC17.49■□□□□ 0.39
PKP4Q99569 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP4Q99569 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PKP4Q99569 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.49■□□□□ 0.39
PKP4Q99569 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP4Q99569 SLC25A6P5-201ENST00000435663 894 ntBASIC17.49■□□□□ 0.39
PKP4Q99569 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.49■□□□□ 0.39
PKP4Q99569 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP4Q99569 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP4Q99569 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.49■□□□□ 0.39
PKP4Q99569 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.49■□□□□ 0.39
PKP4Q99569 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP4Q99569 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP4Q99569 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP4Q99569 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PKP4Q99569 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PKP4Q99569 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP4Q99569 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP4Q99569 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PKP4Q99569 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PKP4Q99569 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PKP4Q99569 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP4Q99569 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP4Q99569 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP4Q99569 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PKP4Q99569 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP4Q99569 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.48■□□□□ 0.39
PKP4Q99569 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP4Q99569 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP4Q99569 AC116407.4-201ENST00000623319 1061 ntBASIC17.48■□□□□ 0.39
PKP4Q99569 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PKP4Q99569 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PKP4Q99569 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP4Q99569 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP4Q99569 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP4Q99569 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP4Q99569 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PKP4Q99569 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms