Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC092437.1-201ENST00000624794 1048 ntBASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB3IPQ96QF0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 AP000593.1-201ENST00000393668 712 ntBASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 PCDHB17P-201ENST00000539533 2393 ntBASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3IPQ96QF0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 AC026691.1-201ENST00000602502 2017 ntBASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3IPQ96QF0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms