Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 AC148477.5-201ENST00000625164 1645 ntBASIC23.54■■□□□ 1.36
NBPF4Q96M43 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 AL353593.2-201ENST00000602529 1483 ntBASIC23.54■■□□□ 1.36
NBPF4Q96M43 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NBPF4Q96M43 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NBPF4Q96M43 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NBPF4Q96M43 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NBPF4Q96M43 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 AC103564.2-201ENST00000432853 1299 ntBASIC23.53■■□□□ 1.36
NBPF4Q96M43 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
NBPF4Q96M43 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 AC006557.2-201ENST00000592985 1240 ntBASIC23.53■■□□□ 1.36
NBPF4Q96M43 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NBPF4Q96M43 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
NBPF4Q96M43 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NBPF4Q96M43 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.53■■□□□ 1.36
NBPF4Q96M43 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.52■■□□□ 1.36
NBPF4Q96M43 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
NBPF4Q96M43 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC23.52■■□□□ 1.36
NBPF4Q96M43 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
NBPF4Q96M43 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.52■■□□□ 1.36
NBPF4Q96M43 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC23.52■■□□□ 1.36
NBPF4Q96M43 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC23.52■■□□□ 1.36
NBPF4Q96M43 AP001160.2-201ENST00000596071 487 ntBASIC23.52■■□□□ 1.36
NBPF4Q96M43 AC064836.3-201ENST00000607928 673 ntBASIC23.52■■□□□ 1.36
NBPF4Q96M43 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NBPF4Q96M43 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
NBPF4Q96M43 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 AC108751.1-201ENST00000490852 363 ntBASIC23.51■■□□□ 1.35
NBPF4Q96M43 AC136632.2-201ENST00000512891 861 ntBASIC23.51■■□□□ 1.35
NBPF4Q96M43 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 AC005593.1-201ENST00000624894 515 ntBASIC23.51■■□□□ 1.35
NBPF4Q96M43 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.51■■□□□ 1.35
NBPF4Q96M43 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NBPF4Q96M43 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NBPF4Q96M43 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NBPF4Q96M43 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
NBPF4Q96M43 AC006504.4-201ENST00000592118 1568 ntBASIC23.5■■□□□ 1.35
NBPF4Q96M43 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NBPF4Q96M43 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NBPF4Q96M43 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NBPF4Q96M43 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.5■■□□□ 1.35
NBPF4Q96M43 MIR1199-201ENST00000621445 119 ntBASIC23.5■■□□□ 1.35
NBPF4Q96M43 AC004706.3-202ENST00000621574 984 ntBASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms