Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 AC133963.1-201ENST00000504166 1679 ntBASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 RCN1P1-201ENST00000400413 996 ntBASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM5Q96HC4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 SPDYE13P-201ENST00000445314 798 ntBASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 AC068472.1-201ENST00000474589 881 ntBASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 AC005332.3-201ENST00000589904 676 ntBASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 AL390719.2-201ENST00000606993 987 ntBASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 LINC01451-201ENST00000623792 534 ntBASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 AL355312.1-201ENST00000407115 2176 ntBASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 AC009949.1-201ENST00000623048 1830 ntBASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM5Q96HC4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 VENTXP5-201ENST00000523979 775 ntBASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 AC022616.7-201ENST00000525383 220 ntBASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 LINC01238-205ENST00000567549 1107 ntBASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM5Q96HC4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
PDLIM5Q96HC4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms