Protein–RNA interactions for Protein: Q96H12

MSANTD3, Myb/SANT-like DNA-binding domain-containing protein 3, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3Q96H12 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 SPDYE21P-201ENST00000413323 827 ntBASIC18.17■□□□□ 0.5
MSANTD3Q96H12 AP006288.1-201ENST00000446065 395 ntBASIC18.17■□□□□ 0.5
MSANTD3Q96H12 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 AC064836.3-201ENST00000607928 673 ntBASIC18.17■□□□□ 0.5
MSANTD3Q96H12 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 AC134684.3-201ENST00000641758 218 ntBASIC18.17■□□□□ 0.5
MSANTD3Q96H12 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 AC138932.1-201ENST00000534164 6830 ntBASIC18.17■□□□□ 0.5
MSANTD3Q96H12 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MSANTD3Q96H12 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 AC108751.1-201ENST00000490852 363 ntBASIC18.16■□□□□ 0.5
MSANTD3Q96H12 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.16■□□□□ 0.5
MSANTD3Q96H12 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.16■□□□□ 0.5
MSANTD3Q96H12 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 AC073621.1-201ENST00000392730 636 ntBASIC18.15■□□□□ 0.5
MSANTD3Q96H12 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSANTD3Q96H12 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MSANTD3Q96H12 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
MSANTD3Q96H12 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MSANTD3Q96H12 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.14■□□□□ 0.49
MSANTD3Q96H12 AL049812.1-201ENST00000432563 2267 ntBASIC18.14■□□□□ 0.49
MSANTD3Q96H12 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MSANTD3Q96H12 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.14■□□□□ 0.49
MSANTD3Q96H12 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms